Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase flavoprotein component ahpf | SO_0956 | P0A155 | - | 991215 - 992798 | 56265.4 |
| alkyl hydroperoxide reductase peroxiredoxin component ahpc | SO_0958 | P0A252 | - | 993033 - 993602 | 20858.8 |
| periplasmic leucyl metal-dependent aminopeptidase | SO_0959 | Q8EI85 | - | 993944 - 995479 | 54334.1 |
| spermine/spermidine synthase family protein | SO_0960 | P60593 | - | 995569 - 996312 | 27377.1 |
| small conductance mechanosensitive ion channel protein mscs family | SO_0961 | Q89AB5 | + | 996403 - 996948 | 20317.4 |
| protein of unknown function duf3332 | SO_0962 | Not Available | + | 997194 - 997718 | 18921.9 |
| outer membrane lipoprotein of unknown function duf903 ygdr | SO_0963 | P65296 | - | 997932 - 998141 | 7839.65 |
| issod2 transposase tnpa_issod2 | SO_0966 | P24577 | - | 998573 - 999648 | 41859.5 |
| fermentative lactate dehydrogenase nadh dependent ldha | SO_0968 | P44501 | - | 1000301 - 1001290 | 36207.8 |
| periplasmic fumarate reductase fcca | SO_0970 | P83223 | - | 1001534 - 1003324 | 62451.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
