Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella oneidensis |
| Strain | MR-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Fresh water |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella oneidensis MR-1
Accession NumberAE014299.2
Gene Summary
Adenine Count
1343980 bp
Thymine Count
1341654 bp
Guanine Count
1143548 bp
Cytosine Count
1140621 bp
Genome Length
4969811 bp
Protein-coding Genes
3947 genes
Non-Coding Genes
267 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnd superfamily efflux pump mfp component | SO_0946 | A6TBH3 | - | 980436 - 981638 | 44039.2 |
| atp-dependent rna helicase srmb | SO_0947 | P21507 | - | 982197 - 983459 | 46812.1 |
| trna (adenine-n(6)-)-methyltransferase yfic | SO_0948 | Q8EI95 | - | 983738 - 984448 | 26343.8 |
| branched-chain amino acid: cation symporter brnq | SO_0949 | P19072 | + | 984997 - 986400 | 49087.8 |
| integrase/recombinase xerd | SO_0950 | Q7ZAJ8 | + | 986481 - 987383 | 34314.2 |
| thiol:disulfide interchange protein dsbc | SO_0951 | P0AEG7 | + | 987534 - 988259 | 26235.9 |
| 5'-3' ssdna exonuclease recj | SO_0952 | P39693 | + | 988352 - 990076 | 63041.7 |
| uncharacterized protein | SO_0953 | Not Available | + | 990120 - 990449 | 12357.5 |
| acteyltransferase gnat family | SO_0954 | I1RV22 | + | 990485 - 990904 | 15719.1 |
| uncharacterized protein | SO_0955 | Not Available | + | 990964 - 991149 | 7019.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
