Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Caryophanales
Family
Bacillaceae
Genus
Bacillus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Caryophanales |
| Family | Bacillaceae |
| Genus | Bacillus |
| Species | Bacillus amyloliquefaciens |
| Strain | F |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1078283 bp
Thymine Count
1067747 bp
Guanine Count
920529 bp
Cytosine Count
913640 bp
Genome Length
3980199 bp
Protein-coding Genes
3684 genes
Non-Coding Genes
375 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uridylate kinase | BAMF_1723 | A7Z4S2 | + | 1721000 - 1721722 | 26111.6 |
| ribosome recycling factor | BAMF_1724 | A7Z4S3 | + | 1721725 - 1722282 | 20653.7 |
| undecaprenyl pyrophosphate synthase | BAMF_1725 | O31751 | + | 1722407 - 1723189 | 29762.9 |
| phosphatidate cytidylyltransferase (cdp-diglyceride synthase) | BAMF_1726 | O31752 | + | 1723202 - 1723990 | 29571.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | BAMF_1727 | A7Z4S6 | + | 1724046 - 1725197 | 42437.2 |
| inner membrane zinc metalloprotease required for the extracytoplasmic stress response mediated by sigma(e) (yael) | BAMF_1728 | O31754 | + | 1725210 - 1726472 | 46346.8 |
| prolyl-trna synthetase | BAMF_1729 | A7Z4S8 | + | 1726505 - 1728199 | 63167.2 |
| dna polymerase iii (alpha subunit) | BAMF_1730 | P13267 | + | 1728311 - 1732624 | 162820.0 |
| putative rna-binding protein | BAMF_1731 | A7Z4T0 | + | 1732867 - 1733337 | 17728.2 |
| transcription translation coupling factor involved in rho-dependent transcription termination | BAMF_1732 | P32727 | + | 1733377 - 1734498 | 41942.8 |
Pathways
1189 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Taurine Metabolism
Taurine Metabolism
Glycolysis and Pyruvate Dehydrogenase
Glycolysis and Pyruvate Dehydrogenase
Arginine Metabolism
Arginine Metabolism
Ornithine Metabolism
Ornithine Metabolism
