Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter rodentium DO 14784
Accession NumberCP082833.1
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter atp-binding protein pota | K7R23_20255 | Q5PMK1 | + | 4278878 - 4280014 | 42894.6 |
| spermidine/putrescine abc transporter permease potb | K7R23_20260 | P0A2J8 | + | 4279998 - 4280861 | 32257.3 |
| type iii secretion system effector espk | K7R23_20265 | Not Available | + | 4281224 - 4282585 | 50870.8 |
| sigma-54 dependent transcriptional regulator | K7R23_20270 | Not Available | - | 4282965 - 4286362 | 128623.0 |
| type iii secretion system effector e3 ubiquitin ligase nlel | K7R23_20275 | B4T918 | - | 4286954 - 4289302 | 87354.6 |
| hypothetical protein | K7R23_20280 | Not Available | - | 4289321 - 4289419 | 3600.42 |
| phage tail fiber c-terminal domain-containing protein | K7R23_20285 | Not Available | - | 4289529 - 4289798 | 9937.22 |
| sigma-54 dependent transcriptional regulator | K7R23_20290 | P76072 | - | 4289800 - 4290923 | 41194.8 |
| ail/lom family outer membrane beta-barrel protein | K7R23_20295 | P03701 | - | 4291075 - 4291191 | 4234.03 |
| spermidine/putrescine abc transporter permease potc | K7R23_20300 | P0AFK8 | + | 4291394 - 4292185 | 29013.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
