Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit alpha | K7R23_18460 | P19319 | - | 3925011 - 3928751 | 140284.0 |
| nark family nitrate/nitrite mfs transporter | K7R23_18465 | P37593 | - | 3928854 - 3930242 | 49709.7 |
| tetr family transcriptional regulator | K7R23_18470 | O31560 | - | 3930464 - 3931051 | 21640.2 |
| mfs transporter | K7R23_18475 | D0ZXQ3 | + | 3931169 - 3932656 | 51592.1 |
| gfa family protein | K7R23_18480 | O14034 | - | 3932658 - 3933086 | 15994.0 |
| porin ompd | K7R23_18485 | Q57P83 | - | 3933178 - 3934278 | 39983.9 |
| aromatic amino acid efflux dmt transporter yddg | K7R23_18490 | P46136 | - | 3934784 - 3935665 | 31362.0 |
| formate dehydrogenase-n subunit alpha | K7R23_18495 | P24183 | + | 3935951 - 3938998 | 112868.0 |
| formate dehydrogenase subunit beta | K7R23_18500 | P0AAJ3 | + | 3939011 - 3939895 | 32313.5 |
| formate dehydrogenase-n subunit gamma | K7R23_18505 | P0AEK8 | + | 3939888 - 3940544 | 25489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
