Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter rodentium |
| Strain | DO 14784 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | cecal and colonic luminal contents; colonic mucosa; gut; gut lumen; lumen |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Citrobacter rodentium DO 14784
Accession NumberCP082833.1
Gene Summary
Adenine Count
1210182 bp
Thymine Count
1208507 bp
Guanine Count
1451262 bp
Cytosine Count
1471924 bp
Genome Length
5341875 bp
Protein-coding Genes
4636 genes
Non-Coding Genes
451 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase acpt | K7R23_04800 | Q8X5U4 | + | 1024340 - 1024924 | 21192.3 |
| phenolic acid decarboxylase | K7R23_04805 | Q9KPX2 | - | 1024921 - 1025427 | 19248.6 |
| lysr family transcriptional regulator | K7R23_04810 | Q765S2 | + | 1025527 - 1026387 | 32159.7 |
| nickel abc transporter substrate-binding protein | K7R23_04815 | P33590 | + | 1026515 - 1028089 | 58968.6 |
| nickel abc transporter permease subunit nikb | K7R23_04820 | P33591 | + | 1028089 - 1029033 | 35201.4 |
| nickel abc transporter permease subunit nikc | K7R23_04825 | P0AFB0 | + | 1029030 - 1029863 | 30408.0 |
| nickel import atp-binding protein nikd | K7R23_04830 | Q8X5U1 | + | 1029863 - 1030627 | 26742.9 |
| nickel import atp-binding protein nike | K7R23_04835 | P33594 | + | 1030624 - 1031424 | 29098.9 |
| nickel-responsive transcriptional regulator nikr | K7R23_04840 | A8AR62 | + | 1031437 - 1031838 | 15050.7 |
| type ii toxin-antitoxin system hicb family antitoxin | K7R23_04845 | Not Available | - | 1032131 - 1032490 | 13276.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
