Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | H3Z74_23465 | Not Available | - | 4990869 - 4991846 | 33866.5 |
| type vi secretion system-associated fha domain protein tagh | H3Z74_23470 | P22216 | - | 4991968 - 4993476 | 52387.8 |
| hypothetical protein | H3Z74_23475 | Not Available | - | 4993473 - 4994042 | 20454.3 |
| type vi secretion system tip protein vgrg | H3Z74_23480 | Q9I737 | - | 4994074 - 4996080 | 73984.6 |
| ompa family protein | H3Z74_23485 | Q9I4Z4 | + | 4996429 - 4996998 | 20056.9 |
| type vi secretion system impa family n-terminal domain-containing protein | H3Z74_23490 | Q9I750 | + | 4997046 - 4998035 | 35843.2 |
| type vi secretion system contractile sheath small subunit | H3Z74_23495 | Q9I749 | + | 4998113 - 4998649 | 19613.3 |
| type vi secretion system contractile sheath large subunit | H3Z74_23500 | Q9I748 | + | 4998676 - 5000169 | 55927.0 |
| type vi secretion system tube protein hcp | H3Z74_23505 | Q9I747 | + | 5000236 - 5000730 | 17590.5 |
| virulence protein scie type | H3Z74_23510 | Q9I746 | + | 5000759 - 5001538 | 27937.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.