Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | H3Z74_04515 | P07021 | - | 983748 - 984239 | 17719.1 |
| diguanylate cyclase | H3Z74_04520 | P46139 | - | 984264 - 985490 | 43414.4 |
| yfir family protein | H3Z74_04525 | P64549 | - | 985487 - 985957 | 16548.1 |
| vanw family protein | H3Z74_04530 | O34611 | - | 986158 - 987909 | 62682.9 |
| mlic family protein | H3Z74_04535 | Not Available | + | 988044 - 988526 | 16294.1 |
| 50s ribosomal protein l1 | H3Z74_04540 | A5V9F6 | - | 988611 - 989309 | 24135.5 |
| 50s ribosomal protein l11 | H3Z74_04545 | A5V9F5 | - | 989314 - 989745 | 15037.3 |
| transcription termination/antitermination protein nusg | H3Z74_04550 | Q9KV35 | - | 989886 - 990422 | 19890.0 |
| preprotein translocase subunit sece | H3Z74_04555 | Q9KV36 | - | 990427 - 990627 | 7465.56 |
| Trna-trp | Not Available | Not Available | + | 991021 - 991097 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.