Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosome-binding factor rbfa | H3Z74_19315 | A5VCZ4 | + | 4162712 - 4163113 | 14919.8 |
| gnat family n-acetyltransferase | H3Z74_19320 | P19650 | + | 4163146 - 4163640 | 18259.5 |
| thymidine kinase | H3Z74_19325 | Q2G5F0 | + | 4163672 - 4164256 | 21127.4 |
| trna pseudouridine(55) synthase trub | H3Z74_19330 | Q2G5F3 | + | 4164262 - 4165158 | 31435.2 |
| 30s ribosomal protein s15 | H3Z74_19335 | Q5NQ31 | + | 4165178 - 4165447 | 10348.6 |
| polyribonucleotide nucleotidyltransferase | H3Z74_19340 | A5VCY9 | + | 4165621 - 4168011 | 85388.9 |
| transcriptional regulator | H3Z74_19345 | Not Available | - | 4168122 - 4168574 | 16909.3 |
| hypothetical protein | H3Z74_19350 | Not Available | - | 4168586 - 4169071 | 17677.0 |
| hypothetical protein | H3Z74_19355 | Not Available | - | 4169120 - 4169470 | 12620.1 |
| helix-turn-helix transcriptional regulator | H3Z74_19360 | Not Available | - | 4169507 - 4170127 | 22134.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.