Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | H3Z74_19265 | O35459 | - | 4151883 - 4152665 | 28074.8 |
| acyl-coa synthetase | H3Z74_19270 | Q9EY88 | - | 4152773 - 4154305 | 54778.4 |
| paai family thioesterase | H3Z74_19275 | Not Available | + | 4154419 - 4154856 | 15773.0 |
| paai family thioesterase | H3Z74_19280 | Not Available | + | 4154856 - 4155254 | 13862.9 |
| pqq-dependent sugar dehydrogenase | H3Z74_19285 | P75804 | - | 4155387 - 4156505 | 39660.9 |
| ribosome maturation protein rimp | H3Z74_19290 | A5VCZ9 | + | 4156691 - 4157275 | 21214.7 |
| transcription termination/antitermination protein nusa | H3Z74_19295 | Q92HF4 | + | 4157275 - 4158891 | 59601.6 |
| 4-oxalocrotonate tautomerase family protein | H3Z74_19300 | P45418 | + | 4158891 - 4159130 | 8163.53 |
| duf448 domain-containing protein | H3Z74_19305 | P32728 | + | 4159209 - 4159946 | 26039.8 |
| translation initiation factor if-2 | H3Z74_19310 | A5VCZ5 | + | 4159943 - 4162666 | 96730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.