Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | H3Z74_18565 | Q49117 | + | 4002441 - 4003190 | 25106.9 |
| mfs transporter | H3Z74_18570 | Q8X625 | + | 4003546 - 4004367 | 27622.7 |
| l,d-transpeptidase family protein | H3Z74_18575 | P22525 | + | 4004412 - 4005920 | 54068.8 |
| hypothetical protein | H3Z74_18580 | Not Available | + | 4005961 - 4006296 | 11036.5 |
| hypothetical protein | H3Z74_18585 | Not Available | - | 4006347 - 4006997 | 23556.5 |
| m20/m25/m40 family metallo-hydrolase | H3Z74_18590 | Q55FR8 | + | 4007179 - 4008567 | 49192.7 |
| tetr family transcriptional regulator c-terminal domain-containing protein | H3Z74_18595 | B2TCK0 | - | 4008694 - 4009287 | 20460.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | H3Z74_18600 | P0ABR8 | + | 4009372 - 4010556 | 45416.2 |
| nad(p)/fad-dependent oxidoreductase | H3Z74_18605 | Q68FT3 | + | 4010661 - 4012268 | 57910.5 |
| hypothetical protein | H3Z74_18610 | Not Available | - | 4012279 - 4012716 | 16310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.