Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | H3Z74_17715 | P23484 | - | 3808095 - 3808553 | 17375.8 |
| duf1826 domain-containing protein | H3Z74_17720 | Not Available | - | 3808695 - 3809333 | 22773.2 |
| merc domain-containing protein | H3Z74_17725 | Not Available | + | 3809407 - 3809796 | 13688.0 |
| glycosyltransferase | H3Z74_17730 | P04678 | + | 3809832 - 3810995 | 40920.1 |
| heparin lyase i family protein | H3Z74_17735 | Not Available | + | 3810992 - 3811744 | 26074.7 |
| sugar transferase | H3Z74_17740 | P14186 | - | 3812233 - 3812961 | 27226.5 |
| polysaccharide deacetylase family protein | H3Z74_17745 | P94361 | - | 3812958 - 3814148 | 44112.1 |
| gnat family n-acetyltransferase | H3Z74_17750 | Not Available | - | 3814145 - 3815188 | 38937.5 |
| peptidoglycan bridge formation glycyltransferase fema/femb family protein | H3Z74_17755 | Not Available | + | 3815289 - 3816341 | 37864.5 |
| hypothetical protein | H3Z74_17760 | Not Available | + | 3816373 - 3817059 | 26309.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.