Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | H3Z74_17515 | A0A0F7GG06 | - | 3746272 - 3747540 | 43976.3 |
| amidohydrolase | H3Z74_17520 | A0A0F7GG06 | - | 3747537 - 3748931 | 48847.1 |
| plp-dependent aminotransferase family protein | H3Z74_17525 | H3ZPL1 | + | 3749086 - 3750300 | 43763.5 |
| abc transporter atp-binding protein | H3Z74_17530 | Q98HF7 | + | 3750333 - 3751418 | 38542.3 |
| polyamine abc transporter substrate-binding protein | H3Z74_17535 | Q9I6R6 | + | 3751415 - 3752464 | 38338.7 |
| abc transporter permease | H3Z74_17540 | P31135 | + | 3752449 - 3753636 | 42333.5 |
| abc transporter permease | H3Z74_17545 | P0AFK8 | + | 3753636 - 3754463 | 29111.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | H3Z74_17550 | Q5SHW0 | + | 3754460 - 3755587 | 40700.3 |
| hypothetical protein | H3Z74_17555 | Not Available | - | 3755900 - 3757126 | 44462.5 |
| amidohydrolase family protein | H3Z74_17560 | P40896 | - | 3757123 - 3758412 | 44992.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.