Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H3Z74_15805 | Not Available | - | 3386423 - 3387273 | 30005.6 |
| alginate lyase family protein | H3Z74_15810 | Not Available | - | 3387395 - 3388567 | 42769.2 |
| alginate lyase family protein | H3Z74_15815 | Not Available | - | 3388624 - 3389799 | 43680.4 |
| tonb-dependent receptor | H3Z74_15820 | Not Available | - | 3389883 - 3392933 | 109383.0 |
| hypothetical protein | H3Z74_15825 | Not Available | - | 3393029 - 3394927 | 69869.8 |
| glycoside hydrolase family 88 protein | H3Z74_15830 | P9WF04 | - | 3394927 - 3396081 | 42704.5 |
| exo 1,3/1,4-beta-d-glucan glucohydrolase | H3Z74_15835 | A7LXU3 | - | 3396072 - 3398492 | 84840.8 |
| d-galactonate dehydratase family protein | H3Z74_15840 | Q1NAJ2 | + | 3398673 - 3399884 | 44855.4 |
| laci family dna-binding transcriptional regulator | H3Z74_15845 | O87590 | + | 3400003 - 3401034 | 37546.1 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | H3Z74_15850 | B4RGF4 | + | 3401148 - 3401987 | 30757.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.