Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | H3Z74_12505 | Q829L5 | - | 2711014 - 2711460 | 16128.8 |
| succinyl-diaminopimelate desuccinylase | H3Z74_12510 | Q1GRJ2 | + | 2711556 - 2712695 | 40063.2 |
| gnat family n-acetyltransferase | H3Z74_12515 | P39979 | + | 2712692 - 2713162 | 17464.7 |
| eal domain-containing protein | H3Z74_12520 | Q9I310 | - | 2713159 - 2714835 | 60433.9 |
| smr/muts family protein | H3Z74_12525 | P76053 | - | 2714906 - 2715526 | 22163.0 |
| murein transglycosylase a | H3Z74_12530 | P0A936 | - | 2715531 - 2716772 | 43536.2 |
| tim44 domain-containing protein | H3Z74_12535 | Q5XF06 | - | 2716789 - 2717433 | 23564.9 |
| protein-export chaperone secb | H3Z74_12540 | A5VD08 | + | 2717636 - 2718148 | 18174.3 |
| murein biosynthesis integral membrane protein murj | H3Z74_12545 | O05467 | + | 2718281 - 2719849 | 55788.7 |
| tryptophan--trna ligase | H3Z74_12550 | Q9AC05 | + | 2719866 - 2720870 | 35723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
