Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | H3Z74_09210 | Q9K1H0 | - | 2005362 - 2008028 | 97955.5 |
| site-2 protease family protein | H3Z74_09215 | Q8UFL7 | - | 2008155 - 2009288 | 40696.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | H3Z74_09220 | Q9X5F2 | - | 2009285 - 2010442 | 41005.6 |
| phosphatidate cytidylyltransferase | H3Z74_09225 | Q8YHH2 | - | 2010439 - 2011221 | 27754.0 |
| isoprenyl transferase | H3Z74_09230 | Q9X5F1 | - | 2011224 - 2011964 | 26914.2 |
| ribosome recycling factor | H3Z74_09235 | A5V3G5 | - | 2011964 - 2012521 | 20231.2 |
| ump kinase | H3Z74_09240 | Q2G8K8 | - | 2012524 - 2013246 | 25502.0 |
| hypothetical protein | H3Z74_09245 | A5V3G3 | - | 2013423 - 2014356 | 34328.4 |
| hypothetical protein | H3Z74_09250 | A5V3G2 | - | 2014456 - 2015408 | 35318.4 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | H3Z74_09255 | P59949 | - | 2015826 - 2016755 | 33328.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.