Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | H3Z74_08760 | A1S0R2 | + | 1917941 - 1919332 | 46802.6 |
| class i sam-dependent rna methyltransferase | H3Z74_08765 | Q9X3W2 | + | 1919329 - 1920513 | 42509.9 |
| trna pseudouridine(38-40) synthase trua | H3Z74_08770 | Q1GWK1 | - | 1921008 - 1921748 | 27196.8 |
| methionyl-trna formyltransferase | H3Z74_08775 | A5VDM0 | - | 1921745 - 1922650 | 31684.4 |
| recombination protein recr | H3Z74_08780 | A5VDM1 | + | 1922704 - 1923300 | 21464.9 |
| peptide deformylase | H3Z74_08785 | A5VDM3 | + | 1923332 - 1923862 | 19406.4 |
| formate--tetrahydrofolate ligase | H3Z74_08790 | Q11G79 | - | 1924044 - 1925708 | 58289.3 |
| dna recombination protein rmuc | H3Z74_08795 | Q9REQ3 | + | 1925787 - 1927187 | 50923.6 |
| 2og-fe(ii) oxygenase | H3Z74_08800 | A6T463 | + | 1927240 - 1928352 | 41497.2 |
| tetratricopeptide repeat protein | H3Z74_08805 | Not Available | + | 1928381 - 1929079 | 25568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.