Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh:flavin oxidoreductase/nadh oxidase | H3Z74_08210 | I1RV17 | - | 1796390 - 1797496 | 39515.4 |
| gamma carbonic anhydrase family protein | H3Z74_08215 | P40882 | - | 1797584 - 1798108 | 17941.8 |
| tonb-dependent receptor | H3Z74_08220 | Q6U607 | + | 1798485 - 1800713 | 79828.8 |
| pepsy domain-containing protein | H3Z74_08225 | P42514 | + | 1800713 - 1801774 | 38929.3 |
| abc-f family atp-binding cassette domain-containing protein | H3Z74_08230 | Q57242 | - | 1801781 - 1803358 | 55489.5 |
| sdr family nad(p)-dependent oxidoreductase | H3Z74_08235 | W6QB10 | - | 1803511 - 1804473 | 33868.1 |
| arac family transcriptional regulator | H3Z74_08240 | Q46855 | + | 1804647 - 1805543 | 32886.0 |
| hypothetical protein | H3Z74_08245 | Not Available | - | 1805594 - 1806850 | 44193.6 |
| ribose-5-phosphate isomerase rpia | H3Z74_08250 | Q1GX07 | + | 1807101 - 1807823 | 24818.8 |
| transketolase | H3Z74_08255 | A0A0I9QGZ2 | + | 1807911 - 1810013 | 75931.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.