Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | H3Z74_08110 | Not Available | - | 1764509 - 1772434 | 249522.0 |
| transcription-repair coupling factor | H3Z74_08115 | Q1RI82 | - | 1772787 - 1776242 | 126165.0 |
| succinate dehydrogenase assembly factor 2 | H3Z74_08120 | C7JGP5 | - | 1776375 - 1776641 | 9875.76 |
| atp-dependent dna helicase recg | H3Z74_08125 | Q9CMB4 | + | 1776727 - 1778787 | 74356.0 |
| pilz domain-containing protein | H3Z74_08130 | Not Available | - | 1778806 - 1779123 | 11507.1 |
| tyrosine--trna ligase | H3Z74_08135 | Q2G6I4 | - | 1779231 - 1780457 | 44766.7 |
| m23 family metallopeptidase | H3Z74_08140 | A0A0H3C9Q9 | - | 1780552 - 1781628 | 37553.9 |
| 5'/3'-nucleotidase sure | H3Z74_08145 | A5V3Z0 | - | 1781666 - 1782430 | 27387.7 |
| serine--trna ligase | H3Z74_08150 | Q2GA28 | - | 1782430 - 1783707 | 46192.0 |
| host attachment protein | H3Z74_08155 | Not Available | + | 1783803 - 1784243 | 16032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.