Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | H3Z74_07610 | Q6F3I7 | + | 1646436 - 1648694 | 82554.9 |
| aspartate-semialdehyde dehydrogenase | H3Z74_07615 | O67716 | + | 1648798 - 1649826 | 37467.0 |
| duf2238 domain-containing protein | H3Z74_07620 | P39270 | + | 1649878 - 1650483 | 22329.3 |
| gfa family protein | H3Z74_07625 | Q9CXS4 | + | 1650506 - 1650943 | 15939.2 |
| dha2 family efflux mfs transporter permease subunit | H3Z74_07630 | Q9RQ29 | - | 1651285 - 1652820 | 54718.1 |
| hlyd family secretion protein | H3Z74_07635 | P44928 | - | 1652813 - 1653895 | 37715.9 |
| winged helix-turn-helix transcriptional regulator | H3Z74_07640 | B2U2E2 | - | 1653888 - 1654334 | 16726.1 |
| hypothetical protein | H3Z74_07645 | Not Available | - | 1654354 - 1655163 | 29477.1 |
| helix-turn-helix domain-containing protein | H3Z74_07650 | Not Available | - | 1655219 - 1655707 | 18717.0 |
| hypothetical protein | H3Z74_07655 | Not Available | + | 1655960 - 1656364 | 14847.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.