Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | H3Z74_07160 | Q1GSZ2 | + | 1565826 - 1566272 | 15500.7 |
| heme lyase ccmf/nrfe family subunit | H3Z74_07165 | P45403 | + | 1566269 - 1568194 | 68258.5 |
| redoxin family protein | H3Z74_07170 | Q9CPM6 | + | 1568191 - 1568718 | 18666.0 |
| cytochrome c-type biogenesis protein ccmh | H3Z74_07175 | P45405 | + | 1568778 - 1569275 | 17913.8 |
| hypothetical protein | H3Z74_07180 | Not Available | + | 1569275 - 1569913 | 22406.2 |
| alanine dehydrogenase | H3Z74_07185 | E1V931 | - | 1570418 - 1571524 | 38516.5 |
| lrp/asnc family transcriptional regulator | H3Z74_07190 | Q44333 | + | 1571659 - 1572135 | 16986.4 |
| potassium transporter kup | H3Z74_07195 | A5V804 | + | 1572271 - 1574184 | 69081.3 |
| 2'-5' rna ligase family protein | H3Z74_07200 | Not Available | + | 1574181 - 1574690 | 18669.6 |
| Trna-met | Not Available | Not Available | + | 1574747 - 1574823 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.