Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gsph/fimt family pseudopilin | H3Z74_07110 | Not Available | + | 1558894 - 1559298 | 14337.1 |
| type ii secretion system minor pseudopilin gspi | H3Z74_07115 | P45775 | + | 1559291 - 1559710 | 14658.8 |
| type ii secretion system minor pseudopilin gspj | H3Z74_07120 | P15749 | + | 1559740 - 1560369 | 22450.9 |
| type ii secretion system minor pseudopilin gspk | H3Z74_07125 | P31706 | + | 1560394 - 1561344 | 33739.7 |
| general secretion pathway protein gspl | H3Z74_07130 | P45789 | + | 1561341 - 1562435 | 38234.7 |
| type ii secretion system protein m | H3Z74_07135 | P41851 | + | 1562432 - 1562911 | 16787.5 |
| hypothetical protein | H3Z74_07140 | Not Available | + | 1562908 - 1563628 | 26056.6 |
| Trna-his | Not Available | Not Available | + | 1563704 - 1563780 | Not Available |
| glu/leu/phe/val dehydrogenase | H3Z74_07150 | Q60030 | + | 1563842 - 1564891 | 35826.7 |
| cytochrome c biogenesis protein ccsa | H3Z74_07155 | P30962 | + | 1564985 - 1565710 | 26345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.