Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas alpina |
| Strain | S8-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas alpina S8-3
Accession NumberCP061038.1
Gene Summary
Adenine Count
935219 bp
Thymine Count
937585 bp
Guanine Count
1658068 bp
Cytosine Count
1666588 bp
Genome Length
5197460 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | H3Z74_07060 | P0C6R0 | + | 1543399 - 1546107 | 97785.4 |
| 2og-fe(ii) oxygenase | H3Z74_07065 | F4JZ24 | - | 1546234 - 1546902 | 24482.2 |
| tonb-dependent receptor | H3Z74_07070 | P17315 | - | 1547075 - 1550062 | 109572.0 |
| fecr domain-containing protein | H3Z74_07075 | P23485 | - | 1550385 - 1551350 | 34358.8 |
| sigma-70 family rna polymerase sigma factor | H3Z74_07080 | P23484 | - | 1551337 - 1551918 | 21749.2 |
| type ii secretory protein pulc | H3Z74_07085 | Not Available | + | 1552389 - 1553234 | 28590.5 |
| hypothetical protein | H3Z74_07090 | E3PJ86 | + | 1553231 - 1555441 | 77671.7 |
| flp pilus assembly complex atpase component tada | H3Z74_07095 | P31741 | + | 1555525 - 1557033 | 53767.2 |
| hypothetical protein | H3Z74_07100 | P31704 | + | 1557026 - 1558253 | 45782.2 |
| type ii secretion system major pseudopilin gspg | H3Z74_07105 | P45773 | + | 1558276 - 1558794 | 18559.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.