Kingdom
Bacillati
Phylum
Bacillota
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Negativicutes |
| Order | Acidaminococcales |
| Family | Acidaminococcaceae |
| Genus | Acidaminococcus |
| Species | Acidaminococcus fermentans |
| Strain | VR4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Acidaminococcus fermentans VR4
Accession NumberCP085936.1
Gene Summary
Adenine Count
517121 bp
Thymine Count
513156 bp
Guanine Count
652201 bp
Cytosine Count
650710 bp
Genome Length
2333188 bp
Protein-coding Genes
2119 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | LK430_06060 | B9DZT0 | + | 1315459 - 1316751 | 46481.8 |
| chorismate synthase | LK430_06065 | E3PV41 | + | 1316732 - 1317820 | 38627.5 |
| prephenate dehydratase | LK430_06070 | Q02286 | + | 1317825 - 1318676 | 31449.6 |
| shikimate dehydrogenase | LK430_06075 | Q8XMI8 | + | 1318673 - 1319497 | 29877.9 |
| shikimate kinase | LK430_06080 | A6M250 | + | 1319490 - 1319990 | 18312.4 |
| mechanosensitive ion channel family protein | LK430_06085 | O66994 | - | 1320065 - 1321114 | 39109.5 |
| glycerate kinase | LK430_06090 | Q9X1S1 | + | 1321226 - 1322455 | 42890.4 |
| amidohydrolase | LK430_06095 | A3KG59 | + | 1322824 - 1324116 | 45936.2 |
| duf3100 domain-containing protein | LK430_06100 | Not Available | + | 1324109 - 1324909 | 28359.7 |
| duf340 domain-containing protein | LK430_06105 | Not Available | + | 1324906 - 1325361 | 15817.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.