Kingdom
Bacillati
Phylum
Bacillota
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Negativicutes |
| Order | Acidaminococcales |
| Family | Acidaminococcaceae |
| Genus | Acidaminococcus |
| Species | Acidaminococcus fermentans |
| Strain | VR4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Acidaminococcus fermentans VR4
Accession NumberCP085936.1
Gene Summary
Adenine Count
517121 bp
Thymine Count
513156 bp
Guanine Count
652201 bp
Cytosine Count
650710 bp
Genome Length
2333188 bp
Protein-coding Genes
2119 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| smc family atpase | LK430_05910 | Q9KM67 | - | 1278566 - 1280839 | 84080.8 |
| exonuclease sbccd subunit d | LK430_05915 | Q5HPJ4 | - | 1280839 - 1281981 | 42508.5 |
| m48 family metallopeptidase | LK430_05920 | P66948 | + | 1282226 - 1283347 | 41137.3 |
| fkbm family methyltransferase | LK430_05925 | Not Available | + | 1283334 - 1284410 | 40958.1 |
| abc transporter substrate-binding protein | LK430_05930 | Q9ZDG2 | + | 1284576 - 1285562 | 34784.5 |
| abc transporter substrate-binding protein | LK430_05935 | Q9ZDG2 | + | 1285581 - 1286573 | 34614.0 |
| abc transporter permease | LK430_05940 | Q9ZDG1 | + | 1286577 - 1287461 | 30680.0 |
| abc transporter atp-binding protein | LK430_05945 | Q1LJ08 | + | 1287461 - 1288255 | 29008.8 |
| diaminopimelate decarboxylase | LK430_05950 | P31851 | + | 1288289 - 1289551 | 46763.2 |
| clc family h(+)/cl(-) exchange transporter | LK430_05955 | A5F0D5 | + | 1289553 - 1291133 | 56296.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.