Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Filimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Filimonas |
| Species | Filimonas lacunae |
| Strain | YT21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Filimonas lacunae YT21
Accession NumberAP017422.1
Gene Summary
Adenine Count
2183771 bp
Thymine Count
2188602 bp
Guanine Count
1725826 bp
Cytosine Count
1716206 bp
Genome Length
7814405 bp
Protein-coding Genes
6357 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide methionine sulfoxide reductase msrb | FLA_4900 | O83641 | + | 6012375 - 6013490 | 41636.1 |
| choline-sulfatase | FLA_4901 | Q32KJ6 | - | 6013580 - 6015007 | 53097.7 |
| beta-galactosidase | FLA_4902 | T2KN75 | - | 6015088 - 6018066 | 112008.0 |
| rhamnogalacturonides degradation protein rhin | FLA_4903 | L7P9J4 | - | 6018174 - 6019316 | 43759.4 |
| polygalacturonase | FLA_4904 | Not Available | - | 6019477 - 6021615 | 80793.8 |
| rhamnogalacturonan acetylesterase | FLA_4905 | Q00017 | - | 6021682 - 6022476 | 29247.1 |
| rhamnogalacturonan lyase in rhamnose utilization cluster | FLA_4906 | O31526 | - | 6022504 - 6024288 | 65158.0 |
| rhamnogalacturonan lyase in rhamnose utilization cluster | FLA_4907 | O31526 | - | 6024477 - 6027065 | 92272.3 |
| polygalacturonase | FLA_4908 | A7PZL3 | - | 6027226 - 6028623 | 50344.2 |
| sialic acid-specific 9-o-acetylesterase | FLA_4909 | P82450 | - | 6028637 - 6030163 | 57284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.