Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Abiotrophia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Aerococcaceae |
| Genus | Abiotrophia |
| Species | Abiotrophia defectiva |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Abiotrophia defectiva subsp. subspepi var. varfungi
Accession NumberCP146287.1
Gene Summary
Adenine Count
547131 bp
Thymine Count
540685 bp
Guanine Count
479650 bp
Cytosine Count
477676 bp
Genome Length
2045142 bp
Protein-coding Genes
1809 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | FOC79_01295 | O14242 | - | 287184 - 288005 | 30294.8 |
| plp-dependent aminotransferase family protein | FOC79_01300 | P94426 | + | 288101 - 289504 | 52971.5 |
| transcription antitermination factor nusb | FOC79_01305 | Q88WM9 | - | 289524 - 289967 | 16498.6 |
| asp23/gls24 family envelope stress response protein | FOC79_01310 | P54519 | - | 289969 - 290388 | 15414.2 |
| aminopeptidase p family protein | FOC79_01315 | P54518 | - | 290411 - 291478 | 39027.8 |
| ribonuclease j | FOC79_01320 | Q45493 | - | 291522 - 293240 | 63410.7 |
| dna-dependent rna polymerase auxiliary subunit epsilon family protein | FOC79_01325 | Q38WN9 | - | 293242 - 293457 | 8187.5 |
| is200/is605 family transposase | FOC79_01330 | P59697 | - | 293747 - 294220 | 18669.7 |
| ssra-binding protein smpb | FOC79_01335 | Q1WSY8 | - | 294382 - 294834 | 17679.6 |
| ribonuclease r | FOC79_01340 | Q9CH00 | - | 294858 - 297455 | 96913.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.