Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea japonica
Accession NumberAP025761.1
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | AMJAP_1982 | Q05354 | - | 2211991 - 2212380 | 14784.8 |
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | AMJAP_1983 | Q9KWS5 | - | 2212748 - 2214271 | 54642.0 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AMJAP_1984 | Q9RPU5 | - | 2214310 - 2215083 | 28690.0 |
| 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AMJAP_1985 | Q9RPU5 | - | 2215098 - 2215760 | 23353.7 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | AMJAP_1986 | A8A876 | - | 2215777 - 2216583 | 28271.0 |
| 2-oxo-hept-3-ene-1,7-dioate hydratase | AMJAP_1987 | P42270 | - | 2216593 - 2217396 | 29042.8 |
| conserved hypothetical protein | AMJAP_1988 | Not Available | + | 2217568 - 2218896 | 47559.2 |
| acetyltransferase | AMJAP_1989 | O07614 | - | 2219050 - 2219511 | 17821.2 |
| conserved hypothetical protein | AMJAP_1990 | Not Available | - | 2219832 - 2220302 | 17841.1 |
| dnak suppressor protein | AMJAP_1991 | P43758 | - | 2220715 - 2221086 | 13900.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.