Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea japonica
Accession NumberAP025761.1
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine2503-c2)-methyltransferase | AMJAP_2798 | A6VV03 | - | 3158767 - 3159900 | 42022.7 |
| nucleoside-diphosphate kinase | AMJAP_2799 | Q1QTL2 | - | 3159954 - 3160361 | 14898.6 |
| conserved hypothetical protein | AMJAP_2800 | Q51384 | - | 3160527 - 3160721 | 7524.79 |
| ferredoxin, 2fe-2s | AMJAP_2801 | Q51383 | - | 3160755 - 3161093 | 12367.5 |
| molecular chaperone hsca | AMJAP_2802 | Q87S24 | - | 3161093 - 3162967 | 66759.9 |
| molecular chaperone hscb | AMJAP_2803 | A5F3G7 | - | 3162974 - 3163513 | 20848.8 |
| iron-sulfur cluster assembly protein | AMJAP_2804 | A8GHY1 | - | 3163544 - 3163867 | 11708.8 |
| nitrogen fixation protein nifu and related proteins | AMJAP_2805 | P0ACD6 | - | 3163903 - 3164289 | 13851.5 |
| cysteine desulfurase | AMJAP_2806 | A1S544 | - | 3164325 - 3165539 | 44687.4 |
| rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor | AMJAP_2807 | O69219 | - | 3165575 - 3166060 | 17621.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.