Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea japonica
Accession NumberAP025761.1
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap dicarboxylate transporter dctp subunit | AMJAP_2361 | Q315G1 | - | 2646383 - 2647399 | 36256.0 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | AMJAP_2362 | P0A9F8 | - | 2647866 - 2648759 | 33578.3 |
| molr family transcriptional regulator | AMJAP_2363 | O32207 | - | 2648878 - 2649951 | 39282.4 |
| formate dehydrogenase, gamma subunit | AMJAP_2364 | Q20719 | + | 2650089 - 2650580 | 17854.4 |
| formate dehydrogenase, beta subunit | AMJAP_2365 | Q46507 | + | 2650580 - 2652196 | 57780.9 |
| formate dehydrogenase, alpha subunit | AMJAP_2366 | Q795Y4 | + | 2652193 - 2655078 | 105535.0 |
| fdhd protein | AMJAP_2367 | O87816 | + | 2655080 - 2655949 | 31129.5 |
| formate dehydrogenase, delta subunit | AMJAP_2368 | Not Available | + | 2655952 - 2656167 | 7882.41 |
| possible pseudogene | AMJAP_2369 | Not Available | - | 2656340 - 2656459 | 4353.52 |
| conserved hypothetical protein | AMJAP_2370 | Not Available | - | 2656644 - 2657333 | 25390.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.