Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea japonica
Accession NumberAP025761.1
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | AMJAP_2311 | P0A9U6 | - | 2593402 - 2593947 | 19931.9 |
| succinate-semialdehyde dehydrogenase (nadp+) | AMJAP_2312 | P0DOV9 | - | 2594571 - 2596028 | 52330.9 |
| coa transferase | AMJAP_2313 | Q7CXU0 | - | 2596191 - 2597396 | 42737.1 |
| glutaryl-coa dehydrogenase | AMJAP_2314 | Q2KHZ9 | - | 2597396 - 2598628 | 45377.5 |
| conserved hypothetical protein | AMJAP_2315 | P0AAR6 | + | 2598964 - 2599362 | 14994.7 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | AMJAP_2316 | Q0B6M7 | + | 2599548 - 2601845 | 86549.7 |
| pyridoxamine 5'-phosphate oxidase | AMJAP_2317 | B8NM62 | + | 2601975 - 2602544 | 21384.1 |
| glutamate racemase | AMJAP_2318 | Q609F9 | - | 2602552 - 2603361 | 29126.0 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | AMJAP_2319 | Not Available | + | 2603717 - 2604058 | 12457.1 |
| conserved hypothetical protein | AMJAP_2320 | Not Available | + | 2604068 - 2604730 | 23523.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.