Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amphritea japonica
Accession NumberAP025761.1
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | AMJAP_1449 | P0AA37 | - | 1648073 - 1648711 | 23812.4 |
| 23s rrna (uracil1939-c5)-methyltransferase | AMJAP_1450 | Q5X5A8 | - | 1648713 - 1650107 | 52192.4 |
| conserved hypothetical protein | AMJAP_1451 | P30177 | + | 1650300 - 1651283 | 36603.0 |
| sodium:hydrogen antiporter | AMJAP_1452 | Q9ZUN3 | - | 1651449 - 1652618 | 42221.3 |
| fe/s biogenesis protein nfua | AMJAP_1453 | C5BJC0 | + | 1653008 - 1653601 | 21721.7 |
| atp-dependent lon protease | AMJAP_1454 | P0A9M1 | + | 1653952 - 1656381 | 90419.5 |
| dna-binding protein hu-beta | AMJAP_1455 | P05384 | + | 1656515 - 1656790 | 9222.01 |
| Trna-asp | Not Available | Not Available | + | 1656830 - 1656906 | Not Available |
| peptidyl-prolyl cis-trans isomerase d | AMJAP_1456 | Q7VKX4 | + | 1657055 - 1658935 | 68238.3 |
| peroxiredoxin | AMJAP_1457 | Not Available | + | 1659195 - 1659716 | 18624.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.