Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:proline symporter | AMJAP_0836 | Not Available | - | 940768 - 942153 | 49981.9 |
| universal stress protein | AMJAP_0837 | Not Available | - | 942345 - 942833 | 17936.9 |
| 4fe-4s ferredoxin | AMJAP_0838 | P94535 | - | 942850 - 945729 | 105638.0 |
| trap dicarboxylate transporter dctm subunit | AMJAP_0839 | Q9KQS1 | - | 945857 - 947242 | 49497.1 |
| trap dicarboxylate transporter dctq subunit | AMJAP_0840 | Not Available | - | 947242 - 947769 | 19933.9 |
| trap dicarboxylate transporter dctp subunit, substrate-binding protein | AMJAP_0841 | Q8YSQ6 | - | 947953 - 949026 | 39193.9 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | AMJAP_0842 | P0ACM1 | + | 949407 - 950189 | 29383.4 |
| pyruvate dehydrogenase e1 component | AMJAP_0843 | Q59637 | + | 950585 - 953242 | 100035.0 |
| pyruvate dehydrogenase e2 component | AMJAP_0844 | P06959 | + | 953276 - 955213 | 66260.6 |
| udp-glucose 6-dehydrogenase | AMJAP_0845 | O86422 | + | 956459 - 957796 | 48890.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.