Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l28 | AMJAP_0811 | A6VSY4 | + | 910043 - 910279 | 9103.27 |
| large subunit ribosomal protein l33 | AMJAP_0812 | Q1QT93 | + | 910291 - 910446 | 6001.44 |
| formamidopyrimidine-dna glycosylase | AMJAP_0813 | A4VRM9 | + | 910536 - 911348 | 29884.5 |
| acylglycerol lipase | AMJAP_0814 | A0A7H0DN16 | + | 911348 - 912256 | 33515.4 |
| signal transduction protein | AMJAP_0815 | Q9I310 | + | 912300 - 914564 | 84262.1 |
| phosphoesterase | AMJAP_0816 | Q57819 | + | 914637 - 915170 | 19174.7 |
| glycosyl transferase | AMJAP_0817 | Q58652 | + | 915207 - 916250 | 39189.1 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | AMJAP_0818 | P56904 | + | 917010 - 917822 | 27992.7 |
| thiamine biosynthesis protein thic | AMJAP_0819 | A5W9V8 | + | 917877 - 919757 | 69866.0 |
| nucleoside 2-deoxyribosyltransferase | AMJAP_0820 | Q9Y7P9 | - | 919827 - 920357 | 19423.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.