Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Oceanospirillales
Family
Oceanospirillaceae
Genus
Amphritea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Oceanospirillales |
| Family | Oceanospirillaceae |
| Genus | Amphritea |
| Species | Amphritea japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
989943 bp
Thymine Count
996795 bp
Guanine Count
905068 bp
Cytosine Count
893892 bp
Genome Length
3785698 bp
Protein-coding Genes
3355 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | AMJAP_0781 | Q608S5 | + | 879944 - 882157 | 78983.2 |
| cytidylate kinase | AMJAP_0782 | Q48FN1 | + | 882159 - 882842 | 24205.0 |
| small subunit ribosomal protein s1 | AMJAP_0783 | Q9HZ71 | + | 882860 - 884542 | 61351.3 |
| integration host factor subunit beta | AMJAP_0784 | Q2SCF7 | + | 884605 - 884910 | 11418.6 |
| conserved hypothetical protein | AMJAP_0785 | Not Available | + | 884937 - 885245 | 11361.5 |
| conserved hypothetical protein | AMJAP_0786 | P0AB60 | + | 885247 - 886422 | 44606.0 |
| orotidine-5'-phosphate decarboxylase | AMJAP_0787 | Q5E3Z6 | + | 886455 - 887162 | 25549.1 |
| competence protein comea | AMJAP_0788 | P0AAR8 | + | 887246 - 887527 | 9959.16 |
| conserved hypothetical protein | AMJAP_0789 | Q58437 | - | 887605 - 888498 | 32432.1 |
| d-tyrosyl-trna(tyr) deacylase | AMJAP_0790 | B3PHR3 | - | 888514 - 888951 | 15761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.