Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase family protein | DYQ05_07860 | P54304 | - | 1678937 - 1680205 | 47353.8 |
| flavodoxin | DYQ05_07865 | Q57746 | - | 1680281 - 1680784 | 19170.9 |
| hypothetical protein | DYQ05_07870 | Q81LM1 | - | 1680816 - 1681602 | 28793.1 |
| iron abc transporter permease | DYQ05_07875 | P49937 | - | 1681614 - 1682591 | 34632.9 |
| iron abc transporter substrate-binding protein | DYQ05_07880 | A7X153 | - | 1682626 - 1683570 | 34962.6 |
| hypothetical protein | DYQ05_07885 | Q8RY11 | + | 1683778 - 1685536 | 65202.3 |
| phosphoribosylamine--glycine ligase | DYQ05_07890 | P20772 | - | 1685646 - 1686956 | 47644.5 |
| d-alanine--d-alanine ligase a | DYQ05_07895 | Q73JN2 | + | 1687090 - 1688196 | 41391.9 |
| hypothetical protein | DYQ05_07900 | Not Available | + | 1688216 - 1688842 | 24625.1 |
| nad(p)h-hydrate dehydratase | DYQ05_07905 | Q9ZJM4 | + | 1688848 - 1690329 | 53318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
