Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DYQ05_10725 | Q06065 | - | 2278170 - 2279540 | 51059.8 |
| Trna-arg | Not Available | Not Available | + | 2279676 - 2279749 | Not Available |
| cytidine deaminase | DYQ05_10735 | Q9S3M0 | - | 2279747 - 2280157 | 14727.6 |
| hypothetical protein | DYQ05_10740 | O83762 | + | 2280181 - 2281281 | 40958.2 |
| hypothetical protein | DYQ05_10745 | O83761 | + | 2281278 - 2281955 | 25553.6 |
| hypothetical protein | DYQ05_10750 | O83760 | + | 2281894 - 2282148 | 9484.59 |
| lysm peptidoglycan-binding domain-containing protein | DYQ05_10755 | Q01100 | + | 2282278 - 2283330 | 38539.5 |
| lytic transglycosylase domain-containing protein | DYQ05_10760 | P0AGC4 | + | 2283395 - 2285518 | 81391.5 |
| hypothetical protein | DYQ05_10765 | Not Available | - | 2285554 - 2286084 | 20232.3 |
| hypothetical protein | DYQ05_10770 | Not Available | - | 2286136 - 2286429 | 9946.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
