Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellin | DYQ05_10675 | P21992 | + | 2268723 - 2269580 | 30808.8 |
| flagellar biosynthesis protein flag | DYQ05_10680 | P39737 | + | 2269871 - 2270233 | 13549.4 |
| flagellar hook protein flid | DYQ05_10685 | O83842 | + | 2270278 - 2272254 | 73476.0 |
| hypothetical protein | DYQ05_10690 | O83843 | + | 2272266 - 2272859 | 21782.0 |
| hypothetical protein | DYQ05_10695 | Not Available | + | 2272878 - 2273144 | 10226.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DYQ05_10700 | O83845 | + | 2273149 - 2273571 | 15652.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DYQ05_10705 | Q9ZCZ9 | + | 2273612 - 2274298 | 25211.0 |
| hd-gyp domain-containing protein | DYQ05_10710 | Q9KSB1 | + | 2274317 - 2275528 | 46106.9 |
| phospho-sugar mutase | DYQ05_10715 | P18159 | + | 2275680 - 2277443 | 65502.6 |
| 3'-5' exonuclease | DYQ05_10720 | O83649 | + | 2277443 - 2278096 | 24568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
