Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | DYQ05_07910 | O83362 | - | 1690347 - 1690895 | 20708.9 |
| yicc family protein | DYQ05_07915 | O34441 | - | 1690909 - 1691775 | 33148.2 |
| udp-n-acetylmuramate--l-alanine ligase | DYQ05_07920 | O83361 | - | 1691772 - 1693220 | 53554.3 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DYQ05_07925 | Q05865 | + | 1693280 - 1694638 | 51168.1 |
| rna pseudouridine synthase | DYQ05_07930 | Q82WZ5 | - | 1694577 - 1695365 | 30022.2 |
| rlua family pseudouridine synthase | DYQ05_07935 | P70870 | - | 1695370 - 1696392 | 38900.3 |
| hypothetical protein | DYQ05_07940 | O83358 | - | 1696373 - 1696930 | 21281.5 |
| ribosomal rna small subunit methyltransferase a | DYQ05_07945 | Q73NS2 | - | 1696942 - 1697847 | 34019.3 |
| helix-turn-helix domain-containing protein | DYQ05_07950 | P71012 | - | 1697859 - 1698506 | 24221.3 |
| duf1361 domain-containing protein | DYQ05_07955 | Not Available | - | 1698664 - 1699329 | 26019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
