Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DYQ05_05715 | O83992 | - | 1290122 - 1290799 | 25611.5 |
| hypothetical protein | DYQ05_05720 | Not Available | + | 1291018 - 1293823 | 107028.0 |
| mate family efflux transporter | DYQ05_05725 | P54181 | + | 1293835 - 1295151 | 47837.0 |
| exonuclease sbccd subunit d | DYQ05_05730 | Q4L654 | + | 1295278 - 1296465 | 44893.9 |
| nuclease sbccd subunit c | DYQ05_05735 | O83635 | + | 1296466 - 1299546 | 116925.0 |
| hypothetical protein | DYQ05_05740 | O83065 | - | 1299829 - 1301881 | 74272.1 |
| carbohydrate abc transporter substrate-binding protein | DYQ05_05745 | Not Available | - | 1301899 - 1303149 | 48304.8 |
| wd40 repeat domain-containing protein | DYQ05_05750 | O83607 | - | 1303186 - 1305462 | 83920.9 |
| hypothetical protein | DYQ05_05755 | O83608 | - | 1305478 - 1306134 | 24754.0 |
| 16s rrna pseudouridine(516) synthase | DYQ05_05760 | O32068 | - | 1306272 - 1307021 | 28314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
