Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Treponematales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Treponematales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pedis |
| Strain | T3552B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Treponema pedis T3552B
Accession NumberCP045670.1
Gene Summary
Adenine Count
912410 bp
Thymine Count
911752 bp
Guanine Count
536769 bp
Cytosine Count
528459 bp
Genome Length
2889390 bp
Protein-coding Genes
2642 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | DYQ05_05015 | P37513 | - | 1137240 - 1138163 | 34369.8 |
| slipin family protein | DYQ05_05020 | O28852 | + | 1138820 - 1139914 | 42111.1 |
| signal peptide peptidase sppa | DYQ05_05025 | P45243 | + | 1140012 - 1141844 | 66669.5 |
| redox-regulated atpase ychf | DYQ05_05030 | Q7VMI2 | + | 1141856 - 1142962 | 40300.2 |
| hypothetical protein | DYQ05_05035 | Not Available | + | 1143020 - 1143430 | 16345.3 |
| hypothetical protein | DYQ05_05040 | Not Available | + | 1143427 - 1144068 | 22751.3 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DYQ05_05045 | O83873 | + | 1144290 - 1145687 | 50935.3 |
| bmp family abc transporter substrate-binding protein | DYQ05_05050 | Q56328 | + | 1145758 - 1146795 | 37901.1 |
| atp-binding cassette domain-containing protein | DYQ05_05055 | O83321 | + | 1146813 - 1148339 | 56340.6 |
| abc transporter permease | DYQ05_05060 | O83323 | + | 1148385 - 1149380 | 36333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
