Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | ACMC5O_000902 | P23890 | - | 848444 - 850351 | 69894.9 |
| cupin domain-containing protein | ACMC5O_000903 | Not Available | + | 850579 - 851079 | 17403.5 |
| signal recognition particle protein | ACMC5O_000904 | P0AGD9 | + | 851299 - 852777 | 51494.3 |
| duf1428 domain-containing protein | ACMC5O_000905 | A5V9P7 | + | 852805 - 853260 | 16428.3 |
| ribosome maturation factor rimm | ACMC5O_000906 | Q1GPJ1 | + | 853525 - 854010 | 17123.3 |
| nad(p)/fad-dependent oxidoreductase | ACMC5O_000907 | Q58931 | - | 854002 - 854916 | 32493.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | ACMC5O_000908 | A5V9Q2 | + | 854966 - 855703 | 26205.2 |
| 50s ribosomal protein l19 | ACMC5O_000909 | A5V9Q3 | + | 855700 - 856101 | 14964.0 |
| duf2189 domain-containing protein | ACMC5O_000910 | Not Available | - | 856105 - 856920 | 28778.5 |
| aspartate-semialdehyde dehydrogenase | ACMC5O_000911 | O67716 | + | 857089 - 858117 | 37173.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.