Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | ACMC5O_000702 | Q2NAN2 | - | 659752 - 660333 | 21317.7 |
| 50s ribosomal protein l25/general stress protein ctc | ACMC5O_000703 | Q1GSP2 | - | 660420 - 661100 | 24305.6 |
| trab/gumn family protein | ACMC5O_000704 | Not Available | - | 661211 - 662023 | 28963.6 |
| trab/gumn family protein | ACMC5O_000705 | P77301 | - | 662268 - 663167 | 32812.6 |
| glycine--trna ligase subunit alpha | ACMC5O_000706 | A5VFX8 | + | 663300 - 664160 | 32227.1 |
| glycine--trna ligase subunit beta | ACMC5O_000707 | B8IBI6 | + | 664148 - 666238 | 75535.2 |
| hypothetical protein | ACMC5O_000708 | Not Available | - | 666275 - 666544 | 10683.6 |
| type ii secretion system f family protein | ACMC5O_000709 | Not Available | - | 666663 - 667652 | 36183.0 |
| type ii secretion system f family protein | ACMC5O_000710 | Not Available | - | 667669 - 668640 | 35121.6 |
| pilus assembly protein cpae | ACMC5O_000711 | O78436 | - | 668695 - 669978 | 45336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.