Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | ACMC5O_000962 | O50236 | + | 919130 - 922474 | 119619.0 |
| transcription elongation factor grea | ACMC5O_000963 | A5V3E1 | + | 922558 - 923037 | 17615.9 |
| rhomboid family intramembrane serine protease | ACMC5O_000964 | Q9SSR0 | + | 923052 - 923678 | 21726.3 |
| duf4170 domain-containing protein | ACMC5O_000965 | Not Available | - | 923675 - 923911 | 8788.32 |
| hypothetical protein | ACMC5O_000966 | Not Available | - | 923963 - 924388 | 14880.5 |
| duf3618 domain-containing protein | ACMC5O_000967 | Not Available | - | 924385 - 924753 | 13189.1 |
| phage holin family protein | ACMC5O_000968 | Not Available | - | 924750 - 925103 | 11991.9 |
| hypothetical protein | ACMC5O_000969 | Not Available | - | 925117 - 925641 | 18567.2 |
| phosphopyruvate hydratase | ACMC5O_000970 | A5V3E8 | + | 925781 - 927070 | 45050.2 |
| septum formation initiator family protein | ACMC5O_000971 | Not Available | + | 927170 - 927451 | 10411.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.