Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ACMC5O_000942 | P52685 | + | 897534 - 898427 | 32772.2 |
| atp-dependent dna helicase recg | ACMC5O_000943 | Q8XD86 | + | 898427 - 900487 | 74929.1 |
| tyrosine--trna ligase | ACMC5O_000944 | Q2G6I4 | - | 900484 - 901707 | 44817.6 |
| domon-like domain-containing protein | ACMC5O_000945 | Not Available | + | 901745 - 902290 | 20181.3 |
| duf1343 domain-containing protein | ACMC5O_000946 | P40407 | + | 902300 - 903496 | 44959.5 |
| methyl-accepting chemotaxis protein | ACMC5O_000947 | C0SP89 | + | 903573 - 904970 | 50992.3 |
| hypothetical protein | ACMC5O_000948 | Not Available | - | 905038 - 905709 | 23386.7 |
| pspc domain-containing protein | ACMC5O_000949 | Not Available | - | 905813 - 906139 | 11654.0 |
| pyridoxamine 5'-phosphate oxidase family protein | ACMC5O_000950 | Not Available | + | 906404 - 906856 | 16896.8 |
| gnat family n-acetyltransferase | ACMC5O_000951 | P31668 | + | 907080 - 907595 | 18642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.