Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | ACMC5O_000852 | Q9X5D8 | + | 804874 - 805956 | 38446.3 |
| multidrug effflux mfs transporter | ACMC5O_000853 | P28246 | - | 805966 - 807240 | 44588.6 |
| xaa-pro peptidase family protein | ACMC5O_000854 | O31689 | + | 807304 - 808563 | 45506.6 |
| dicarboxylate/amino acid:cation symporter | ACMC5O_000855 | P24944 | - | 808568 - 809884 | 46936.3 |
| kpsf/gutq family sugar-phosphate isomerase | ACMC5O_000856 | O67500 | + | 809982 - 810968 | 34563.5 |
| manno-octulosonate cytidylyltransferase | ACMC5O_000857 | Q0AST1 | + | 810965 - 811762 | 28803.6 |
| tigr01459 family had-type hydrolase | ACMC5O_000858 | P46351 | + | 811759 - 812562 | 28693.0 |
| 3-deoxy-8-phosphooctulonate synthase | ACMC5O_000859 | Q7WD73 | + | 812573 - 813424 | 30752.9 |
| hypothetical protein | ACMC5O_000860 | Not Available | + | 813421 - 814296 | 33817.0 |
| elm1/gtroc1 family putative glycosyltransferase | ACMC5O_000861 | Q93YN4 | - | 814276 - 815268 | 36362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.