Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1428 domain-containing protein | ACMC5O_000772 | Q8DDX8 | - | 734703 - 735880 | 41707.1 |
| duf885 family protein | ACMC5O_000773 | Not Available | - | 735925 - 737592 | 61807.4 |
| hypothetical protein | ACMC5O_000774 | Not Available | - | 737710 - 738663 | 35461.8 |
| 2-polyprenylphenol 6-hydroxylase | ACMC5O_000775 | Q9K0N0 | - | 738835 - 740367 | 56506.3 |
| class i sam-dependent methyltransferase | ACMC5O_000776 | Q9X3X2 | - | 740364 - 741104 | 27666.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | ACMC5O_000777 | Q2GAT0 | + | 741153 - 741959 | 29489.4 |
| 30s ribosomal protein s20 | ACMC5O_000778 | Q9Z5V0 | + | 742067 - 742330 | 9633.75 |
| chromosomal replication initiator protein dnaa | ACMC5O_000779 | Q9S493 | + | 742702 - 744102 | 51895.5 |
| duf4136 domain-containing protein | ACMC5O_000780 | Not Available | - | 744181 - 744903 | 26719.5 |
| tryptophan--trna ligase | ACMC5O_000781 | Q9AC05 | - | 744986 - 745981 | 36083.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.