Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein gcvh | ACMC5O_000722 | Q2W9A4 | + | 679574 - 679945 | 13494.6 |
| methyltransferase domain-containing protein | ACMC5O_000723 | O74529 | + | 679927 - 680691 | 27428.2 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | ACMC5O_000724 | Q1GRZ2 | + | 680692 - 682050 | 48317.2 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | ACMC5O_000725 | Q9A354 | + | 682047 - 683612 | 55583.6 |
| duf938 domain-containing protein | ACMC5O_000726 | Q7ZVJ8 | + | 683613 - 684263 | 23695.1 |
| pilz domain-containing protein | ACMC5O_000727 | Not Available | + | 684299 - 684709 | 15427.3 |
| pilz domain-containing protein | ACMC5O_000728 | Not Available | - | 684712 - 685377 | 24970.2 |
| tonb-dependent receptor | ACMC5O_000729 | Not Available | - | 685447 - 687945 | 89513.5 |
| tonb-dependent receptor | ACMC5O_000730 | Not Available | + | 688363 - 691428 | 110538.0 |
| tryptophan halogenase family protein | ACMC5O_000731 | Q8KHZ8 | + | 691540 - 693102 | 56633.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.