Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpad family pilus assembly lipoprotein | ACMC5O_000712 | Not Available | - | 669978 - 670616 | 21839.5 |
| type ii and iii secretion system protein family protein | ACMC5O_000713 | P55702 | - | 670646 - 672073 | 49453.4 |
| flp pilus assembly protein cpab | ACMC5O_000714 | Not Available | - | 672074 - 673102 | 35035.2 |
| prepilin peptidase | ACMC5O_000715 | P15378 | - | 673148 - 673621 | 16672.2 |
| fad-dependent oxidoreductase | ACMC5O_000716 | Q9HXE3 | + | 673672 - 674766 | 39388.4 |
| rod shape-determining protein | ACMC5O_000717 | A0A0H3C7V4 | + | 674924 - 675967 | 36440.9 |
| ribonuclease hi | ACMC5O_000718 | A4Z216 | - | 675964 - 676434 | 17432.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ACMC5O_000719 | A4WVQ4 | - | 676434 - 677390 | 34642.6 |
| hypothetical protein | ACMC5O_000720 | Not Available | + | 677483 - 678115 | 22379.8 |
| glycine cleavage system aminomethyltransferase gcvt | ACMC5O_000721 | O14110 | + | 678453 - 679577 | 40930.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.