Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sediminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sediminicola
Accession NumberCP178916.1
Gene Summary
Adenine Count
510747 bp
Thymine Count
512278 bp
Guanine Count
866983 bp
Cytosine Count
866574 bp
Genome Length
2756582 bp
Protein-coding Genes
2791 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | ACMC5O_000682 | Q7VVJ8 | + | 642471 - 643103 | 22881.1 |
| membrane lipoprotein lipid attachment site-containing protein | ACMC5O_000683 | Not Available | - | 643105 - 643425 | 10435.7 |
| hypothetical protein | ACMC5O_000684 | Not Available | - | 643523 - 643780 | 8245.34 |
| lipoyl(octanoyl) transferase lipb | ACMC5O_000685 | Q1GTF8 | - | 643868 - 644530 | 24094.9 |
| glycerophosphoryl diester phosphodiesterase membrane domain-containing protein | ACMC5O_000686 | Not Available | + | 644628 - 645449 | 28034.4 |
| gnat family n-acetyltransferase | ACMC5O_000687 | C7R1N6 | - | 645446 - 646027 | 21751.0 |
| oxygen-dependent coproporphyrinogen oxidase | ACMC5O_000688 | Q9AAT8 | - | 646024 - 646887 | 32137.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | ACMC5O_000689 | Q92IR2 | + | 647064 - 647636 | 20115.1 |
| cytochrome b/b6 | ACMC5O_000690 | P23134 | + | 647654 - 648964 | 49034.3 |
| cytochrome c1 | ACMC5O_000691 | Q9LK29 | + | 648979 - 649902 | 33614.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.